Hi everyone. I am molecular biologist Working on NGS sequencing data from Kenya. I'm interested in building workflows through the Latch Sdk. I'm still new to workflows using flyte. Hoping to learn the details.

Welcome to the community steve

Hi, Steve. Welcome to the community.

Thanks for the kind gestures

Hi Steve! I'm interested in NGS workflows as well! Let me know if you ever want to chat about something or bounce ideas off each other

Hi @Kirk Gosik sorry to have missed this. But Oo yea definitely. Let me hook up to chat interests.

Sounds good. Let me know some times that work for you

Sounds great. I'm currently scripting workflows with latch. They actually use the flyte syntax. Done nextflow as well.

this is great to hear

Cool. One of the concerns is passing files. Adjustments have been made to return multiple file outputs. Is there a better way to handle multiple file inputs. Say input multiple files is a directory and want the command to process each file? I'm currently using a for loop. Don't know if there are other ways

@George Odette do you mean, using one container to execute one file - and use something like

map task

on directories?

So I've not used a map task before. But it might be different. Assuming I have a directory containing about 100 files, and I want to perform a trimming task to each file, would a map task be convinient? I'll hang on one of your office hours

sure lets do that

Cool. That would be tomorrow?

its on wednesdays

That's cool.